Virus Pathogens in Australian Vineyards with an Emphasis on Shiraz Disease.
Identifieur interne : 000007 ( Main/Exploration ); précédent : 000006; suivant : 000008Virus Pathogens in Australian Vineyards with an Emphasis on Shiraz Disease.
Auteurs : Qi Wu [Australie] ; Nuredin Habili [Australie] ; Fiona Constable [Australie] ; Maher Al Al Rwahnih [États-Unis] ; Darius E. Goszczynski [Afrique du Sud] ; Yeniu Wang [Australie] ; Vinay Pagay [Australie]Source :
- Viruses [ 1999-4915 ] ; 2020.
Abstract
Grapevine viruses are found throughout the viticultural world and have detrimental effects on vine productivity and grape and wine quality. This report provides a comprehensive and up-to-date review on grapevine viruses in Australia with a focus on "Shiraz Disease" (SD) and its two major associated viruses, grapevine virus A (GVA) and grapevine leafroll-associated virus 3 (GLRaV-3). Sensitive grapevine cultivars like Shiraz infected with GVA alone or with a co-infection of a leafroll virus, primarily GLRaV-3, show symptoms of SD leading to significant yield and quality reductions in Australia and in South Africa. Symptom descriptors for SD will be outlined and a phylogenetic tree will be presented indicating the SD-associated isolates of GVA in both countries belong to the same clade. Virus transmission, which occurs through infected propagation material, grafting, and naturally vectored by mealybugs and scale insects, will be discussed. Laboratory and field-based indexing will also be discussed along with management strategies including rogueing and replanting certified stock that decrease the incidence and spread of SD. Finally, we present several cases of SD incidence in South Australian vineyards and their effects on vine productivity. We conclude by offering strategies for virus detection and management that can be adopted by viticulturists. Novel technologies such as high throughput sequencing and remote sensing for virus detection will be outlined.
DOI: 10.3390/v12080818
PubMed: 32731601
PubMed Central: PMC7472089
Affiliations:
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Box 197, Glen Osmond, Adelaide, South Australia 5064, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>The Australian Wine Research Institute, P.O. Box 197, Glen Osmond, Adelaide, South Australia 5064</wicri:regionArea><wicri:noRegion>South Australia 5064</wicri:noRegion></affiliation></author><author><name sortKey="Habili, Nuredin" sort="Habili, Nuredin" uniqKey="Habili N" first="Nuredin" last="Habili">Nuredin Habili</name><affiliation wicri:level="1"><nlm:affiliation>The Australian Wine Research Institute, P.O. Box 197, Glen Osmond, Adelaide, South Australia 5064, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>The Australian Wine Research Institute, P.O. Box 197, Glen Osmond, Adelaide, South Australia 5064</wicri:regionArea><wicri:noRegion>South Australia 5064</wicri:noRegion></affiliation></author><author><name sortKey="Constable, Fiona" sort="Constable, Fiona" uniqKey="Constable F" first="Fiona" last="Constable">Fiona Constable</name><affiliation wicri:level="1"><nlm:affiliation>Agriculture Victoria Research, Department of Economic Development, Jobs, Transport and Resources, AgriBio, Bundoora, Melbourne, Victoria 3083, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>Agriculture Victoria Research, Department of Economic Development, Jobs, Transport and Resources, AgriBio, Bundoora, Melbourne, Victoria 3083</wicri:regionArea><wicri:noRegion>Victoria 3083</wicri:noRegion></affiliation></author><author><name sortKey="Al Rwahnih, Maher Al" sort="Al Rwahnih, Maher Al" uniqKey="Al Rwahnih M" first="Maher Al" last="Al Rwahnih">Maher Al Al Rwahnih</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Pathology, University of California, Davis, CA 95616, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Pathology, University of California, Davis, CA 95616</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Goszczynski, Darius E" sort="Goszczynski, Darius E" uniqKey="Goszczynski D" first="Darius E" last="Goszczynski">Darius E. Goszczynski</name><affiliation wicri:level="1"><nlm:affiliation>Plant Protection Research Institute, Agricultural Research Council, Private Bag X134, Pretoria 0001, South Africa.</nlm:affiliation><country xml:lang="fr">Afrique du Sud</country><wicri:regionArea>Plant Protection Research Institute, Agricultural Research Council, Private Bag X134, Pretoria 0001</wicri:regionArea><wicri:noRegion>Pretoria 0001</wicri:noRegion></affiliation></author><author><name sortKey="Wang, Yeniu" sort="Wang, Yeniu" uniqKey="Wang Y" first="Yeniu" last="Wang">Yeniu Wang</name><affiliation wicri:level="1"><nlm:affiliation>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064</wicri:regionArea><wicri:noRegion>South Australia 5064</wicri:noRegion></affiliation></author><author><name sortKey="Pagay, Vinay" sort="Pagay, Vinay" uniqKey="Pagay V" first="Vinay" last="Pagay">Vinay Pagay</name><affiliation wicri:level="1"><nlm:affiliation>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064, Australia.</nlm:affiliation><country xml:lang="fr">Australie</country><wicri:regionArea>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064</wicri:regionArea><wicri:noRegion>South Australia 5064</wicri:noRegion></affiliation></author></analytic><series><title level="j">Viruses</title><idno type="eISSN">1999-4915</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Grapevine viruses are found throughout the viticultural world and have detrimental effects on vine productivity and grape and wine quality. This report provides a comprehensive and up-to-date review on grapevine viruses in Australia with a focus on "Shiraz Disease" (SD) and its two major associated viruses, grapevine virus A (GVA) and grapevine leafroll-associated virus 3 (GLRaV-3). Sensitive grapevine cultivars like Shiraz infected with GVA alone or with a co-infection of a leafroll virus, primarily GLRaV-3, show symptoms of SD leading to significant yield and quality reductions in Australia and in South Africa. Symptom descriptors for SD will be outlined and a phylogenetic tree will be presented indicating the SD-associated isolates of GVA in both countries belong to the same clade. Virus transmission, which occurs through infected propagation material, grafting, and naturally vectored by mealybugs and scale insects, will be discussed. Laboratory and field-based indexing will also be discussed along with management strategies including rogueing and replanting certified stock that decrease the incidence and spread of SD. Finally, we present several cases of SD incidence in South Australian vineyards and their effects on vine productivity. We conclude by offering strategies for virus detection and management that can be adopted by viticulturists. Novel technologies such as high throughput sequencing and remote sensing for virus detection will be outlined.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">32731601</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>15</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1999-4915</ISSN><JournalIssue CitedMedium="Internet"><Volume>12</Volume><Issue>8</Issue><PubDate><Year>2020</Year><Month>07</Month><Day>28</Day></PubDate></JournalIssue><Title>Viruses</Title><ISOAbbreviation>Viruses</ISOAbbreviation></Journal><ArticleTitle>Virus Pathogens in Australian Vineyards with an Emphasis on Shiraz Disease.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E818</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/v12080818</ELocationID><Abstract><AbstractText>Grapevine viruses are found throughout the viticultural world and have detrimental effects on vine productivity and grape and wine quality. This report provides a comprehensive and up-to-date review on grapevine viruses in Australia with a focus on "Shiraz Disease" (SD) and its two major associated viruses, grapevine virus A (GVA) and grapevine leafroll-associated virus 3 (GLRaV-3). Sensitive grapevine cultivars like Shiraz infected with GVA alone or with a co-infection of a leafroll virus, primarily GLRaV-3, show symptoms of SD leading to significant yield and quality reductions in Australia and in South Africa. Symptom descriptors for SD will be outlined and a phylogenetic tree will be presented indicating the SD-associated isolates of GVA in both countries belong to the same clade. Virus transmission, which occurs through infected propagation material, grafting, and naturally vectored by mealybugs and scale insects, will be discussed. Laboratory and field-based indexing will also be discussed along with management strategies including rogueing and replanting certified stock that decrease the incidence and spread of SD. Finally, we present several cases of SD incidence in South Australian vineyards and their effects on vine productivity. We conclude by offering strategies for virus detection and management that can be adopted by viticulturists. Novel technologies such as high throughput sequencing and remote sensing for virus detection will be outlined.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wu</LastName><ForeName>Qi</ForeName><Initials>Q</Initials><AffiliationInfo><Affiliation>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064, Australia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>The Australian Wine Research Institute, P.O. Box 197, Glen Osmond, Adelaide, South Australia 5064, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Habili</LastName><ForeName>Nuredin</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>The Australian Wine Research Institute, P.O. Box 197, Glen Osmond, Adelaide, South Australia 5064, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Constable</LastName><ForeName>Fiona</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>Agriculture Victoria Research, Department of Economic Development, Jobs, Transport and Resources, AgriBio, Bundoora, Melbourne, Victoria 3083, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Al Rwahnih</LastName><ForeName>Maher Al</ForeName><Initials>MA</Initials><AffiliationInfo><Affiliation>Department of Plant Pathology, University of California, Davis, CA 95616, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Goszczynski</LastName><ForeName>Darius E</ForeName><Initials>DE</Initials><AffiliationInfo><Affiliation>Plant Protection Research Institute, Agricultural Research Council, Private Bag X134, Pretoria 0001, South Africa.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Yeniu</ForeName><Initials>Y</Initials><Identifier Source="ORCID">0000-0001-7596-1509</Identifier><AffiliationInfo><Affiliation>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pagay</LastName><ForeName>Vinay</ForeName><Initials>V</Initials><Identifier Source="ORCID">0000-0003-1916-2758</Identifier><AffiliationInfo><Affiliation>School of Agriculture, Food & Wine, University of Adelaide, Waite Precinct, PMB 1, Glen Osmond, Adelaide, South Australia 5064, Australia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D016454">Review</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>07</Month><Day>28</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Viruses</MedlineTA><NlmUniqueID>101509722</NlmUniqueID><ISSNLinking>1999-4915</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">grapevine</Keyword><Keyword MajorTopicYN="Y">high throughput sequencing</Keyword><Keyword MajorTopicYN="Y">leafroll disease</Keyword><Keyword MajorTopicYN="Y">mealybugs</Keyword><Keyword MajorTopicYN="Y">rogueing</Keyword><Keyword MajorTopicYN="Y">scale insects</Keyword><Keyword MajorTopicYN="Y">vectors</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>06</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2020</Year><Month>06</Month><Day>24</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>07</Month><Day>25</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>8</Month><Day>1</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>8</Month><Day>1</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>8</Month><Day>1</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">32731601</ArticleId><ArticleId IdType="pii">v12080818</ArticleId><ArticleId IdType="doi">10.3390/v12080818</ArticleId><ArticleId IdType="pmc">PMC7472089</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Phytopathology. 2008 Oct;98(10):1093-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18943455</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Dis. 2009 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IdType="pubmed">27491434</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Afrique du Sud</li><li>Australie</li><li>États-Unis</li></country><region><li>Californie</li></region></list><tree><country name="Australie"><noRegion><name sortKey="Wu, Qi" sort="Wu, Qi" uniqKey="Wu Q" first="Qi" last="Wu">Qi Wu</name></noRegion><name sortKey="Constable, Fiona" sort="Constable, Fiona" uniqKey="Constable F" first="Fiona" last="Constable">Fiona Constable</name><name sortKey="Habili, Nuredin" sort="Habili, Nuredin" uniqKey="Habili N" first="Nuredin" last="Habili">Nuredin Habili</name><name sortKey="Pagay, Vinay" sort="Pagay, Vinay" uniqKey="Pagay V" first="Vinay" last="Pagay">Vinay Pagay</name><name sortKey="Wang, Yeniu" sort="Wang, Yeniu" uniqKey="Wang Y" first="Yeniu" last="Wang">Yeniu Wang</name><name sortKey="Wu, Qi" sort="Wu, Qi" uniqKey="Wu Q" first="Qi" last="Wu">Qi Wu</name></country><country name="États-Unis"><region name="Californie"><name sortKey="Al Rwahnih, Maher Al" sort="Al Rwahnih, Maher Al" uniqKey="Al Rwahnih M" first="Maher Al" last="Al Rwahnih">Maher Al Al Rwahnih</name></region></country><country name="Afrique du Sud"><noRegion><name sortKey="Goszczynski, Darius E" sort="Goszczynski, Darius E" uniqKey="Goszczynski D" first="Darius E" last="Goszczynski">Darius E. 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